Scientific References

Scientific References#

[Ac24]

Hernan Arango and contributors. Rutgers roms. 2024. URL: myroms/roms.

[BCG+24]

Ashley J. Barnes, Navid C. Constantinou, Angus H. Gibson, Andrew E. Kiss, Chris Chapman, John Reilly, Dhruv Bhagtani, and Luwei Yang. Regional-mom6: A Python package for automatic generation of regional configurations for the Modular Ocean Model 6. Journal of Open Source Software, 9(100):6857, August 2024. URL: https://joss.theoj.org/papers/10.21105/joss.06857, doi:10.21105/joss.06857.

[BOSS23]

Nathan Bell, Luke N. Olson, Jacob Schroder, and Ben Southworth. PyAMG: algebraic multigrid solvers in python. Journal of Open Source Software, 8(87):5495, 2023. URL: https://doi.org/10.21105/joss.05495, doi:10.21105/joss.05495.

[Bc25]

Julius Busecke and contributors. Xgcm. 2025. URL: xgcm/xgcm.

[DT02]

Aiguo Dai and Kevin E. Trenberth. Estimates of Freshwater Discharge from Continents: Latitudinal and Seasonal Variations. Journal of Hydrometeorology, December 2002. Section: Journal of Hydrometeorology. URL: https://journals.ametsoc.org/view/journals/hydr/3/6/1525-7541_2002_003_0660_eofdfc_2_0_co_2.xml, doi:10.1175/1525-7541(2002)003<0660:EOFDFC>2.0.CO;2.

[EE02]

Gary D. Egbert and Svetlana Y. Erofeeva. Efficient Inverse Modeling of Barotropic Ocean Tides. Journal of Atmospheric and Oceanic Technology, 19(2):183–204, February 2002. Publisher: American Meteorological Society. URL: https://journals.ametsoc.org/doi/full/10.1175/1520-0426%282002%29019%3C0183%3AEIMOBO%3E2.0.CO%3B2, doi:10.1175/1520-0426(2002)019<0183:EIMOBO>2.0.CO;2.

[GBB+19]

H. E. Garcia, T. P. Boyer, O. K. Baranova, R. A. Locarnini, A. V. Mishonov, A. Grodsky, C. R. Paver, K. W. Weathers, I. V. Smolyar, J. R. Reagan, D. Seidov, and M. M. Zweng. World Ocean Atlas 2018: Product Documentation. 2019.

[HPB+22]

Douglas S. Hamilton, Morgane M. G. Perron, Tami C. Bond, Andrew R. Bowie, Rebecca R. Buchholz, Cecile Guieu, Akinori Ito, Willy Maenhaut, Stelios Myriokefalitakis, Nazlı Olgun, Sagar D. Rathod, Kerstin Schepanski, Alessandro Tagliabue, Robert Wagner, and Natalie M. Mahowald. Earth, Wind, Fire, and Pollution: Aerosol Nutrient Sources and Impacts on Ocean Biogeochemistry. Annual Review of Marine Science, 14(Volume 14, 2022):303–330, January 2022. Publisher: Annual Reviews. URL: https://www.annualreviews.org/content/journals/10.1146/annurev-marine-031921-013612, doi:10.1146/annurev-marine-031921-013612.

[HSB+24]

Mathias Hauser, Aaron Spring, Julius Busecke, Martin van Driel, Ruth Lorenz, and readthedocs-assistant. Regionmask/regionmask: version 0.12.1. March 2024. URL: https://zenodo.org/records/10849860, doi:10.5281/zenodo.10849860.

[Hc23]

Kate Hedstrom and contributors. Pyroms. 2023. URL: ESMG/pyroms.

[HBB+20]

Hans Hersbach, Bill Bell, Paul Berrisford, Shoji Hirahara, András Horányi, Joaquín Muñoz-Sabater, Julien Nicolas, Carole Peubey, Raluca Radu, Dinand Schepers, Adrian Simmons, Cornel Soci, Saleh Abdalla, Xavier Abellan, Gianpaolo Balsamo, Peter Bechtold, Gionata Biavati, Jean Bidlot, Massimo Bonavita, Giovanna De Chiara, Per Dahlgren, Dick Dee, Michail Diamantakis, Rossana Dragani, Johannes Flemming, Richard Forbes, Manuel Fuentes, Alan Geer, Leo Haimberger, Sean Healy, Robin J. Hogan, Elías Hólm, Marta Janisková, Sarah Keeley, Patrick Laloyaux, Philippe Lopez, Cristina Lupu, Gabor Radnoti, Patricia de Rosnay, Iryna Rozum, Freja Vamborg, Sebastien Villaume, and Jean-Noël Thépaut. The era5 global reanalysis. Quarterly Journal of the Royal Meteorological Society, 146(730):1999–2049, 2020. URL: https://rmets.onlinelibrary.wiley.com/doi/abs/10.1002/qj.3803, arXiv:https://rmets.onlinelibrary.wiley.com/doi/pdf/10.1002/qj.3803, doi:10.1002/qj.3803.

[HH17]

Stephan Hoyer and Joe Hamman. Xarray: nd labeled arrays and datasets in python. Journal of Open Research Software, 2017. doi:10.5334/jors.148.

[HTC22]

Yibin Huang, Alessandro Tagliabue, and Nicolas Cassar. Data-Driven Modeling of Dissolved Iron in the Global Ocean. Frontiers in Marine Science, May 2022. Publisher: Frontiers. URL: https://www.frontiersin.org/journals/marine-science/articles/10.3389/fmars.2022.837183/full, doi:10.3389/fmars.2022.837183.

[KAA+21]

Jasper F. Kok, Adeyemi A. Adebiyi, Samuel Albani, Yves Balkanski, Ramiro Checa-Garcia, Mian Chin, Peter R. Colarco, Douglas S. Hamilton, Yue Huang, Akinori Ito, Martina Klose, Danny M. Leung, Longlei Li, Natalie M. Mahowald, Ron L. Miller, Vincenzo Obiso, Carlos Pérez García-Pando, Adriana Rocha-Lima, Jessica S. Wan, and Chloe A. Whicker. Improved representation of the global dust cycle using observational constraints on dust properties and abundance. Atmospheric Chemistry and Physics, 21(10):8127–8167, May 2021. Publisher: Copernicus GmbH. URL: https://acp.copernicus.org/articles/21/8127/2021/, doi:10.5194/acp-21-8127-2021.

[LGB16]

Peter Landschützer, Nicolas Gruber, and Dorothee C. E. Bakker. Decadal variations and trends of the global ocean carbon sink. Global Biogeochemical Cycles, 30(10):1396–1417, 2016. URL: https://onlinelibrary.wiley.com/doi/abs/10.1002/2015GB005359, doi:10.1002/2015GB005359.

[LKO+16]

Siv K. Lauvset, Robert M. Key, Are Olsen, Steven van Heuven, Anton Velo, Xiaohua Lin, Carsten Schirnick, Alex Kozyr, Toste Tanhua, Mario Hoppema, Sara Jutterström, Reiner Steinfeldt, Emil Jeansson, Masao Ishii, Fiz F. Perez, Toru Suzuki, and Sylvain Watelet. A new global interior ocean mapped climatology: the 1° × 1° GLODAP version 2. Earth System Science Data, 8(2):325–340, August 2016. URL: https://www.earth-syst-sci-data.net/8/325/2016/, doi:10.5194/essd-8-325-2016.

[LBBG+21]

Eric Lellouche, Jean-Michel Greiner, Romain Bourdallé-Badie, Gilles Garric, Angélique Melet, Marie Drévillon, Clément Bricaud, Mathieu Hamon, Olivier Le Galloudec, Charly Regnier, Tony Candela, Charles-Emmanuel Testut, Florent Gasparin, Giovanni Ruggiero, Mounir Benkiran, Yann Drillet, and Pierre-Yves Le Traon. The Copernicus Global 1/12° Oceanic and Sea Ice GLORYS12 Reanalysis. Frontiers in Earth Science, July 2021. Publisher: Frontiers. URL: https://www.frontiersin.org/journals/earth-science/articles/10.3389/feart.2021.698876/full, doi:10.3389/feart.2021.698876.

[LKS+12]

Florian Lemarié, Jaison Kurian, Alexander F. Shchepetkin, M. Jeroen Molemaker, François Colas, and James C. McWilliams. Are there inescapable issues prohibiting the use of terrain-following coordinates in climate models? Ocean Modelling, 42:57–79, January 2012. URL: https://www.sciencedirect.com/science/article/pii/S1463500311001831, doi:10.1016/j.ocemod.2011.11.007.

[Mol24]

Jeroen Molemaker. Ucla matlab tools. 2024. URL: nmolem/ucla-tools.

[Mc25a]

Jeroen Molemaker and contributors. Ucla-roms. 2025. URL: CESR-lab/ucla-roms.

[Mc25b]

Jeroen Molemaker and contributors. Ucla-roms. 2025. URL: CWorthy-ocean/ucla-roms.

[SM09]

Alexander F. Shchepetkin and James C. McWilliams. Correction and commentary for “Ocean forecasting in terrain-following coordinates: Formulation and skill assessment of the regional ocean modeling system” by Haidvogel et al., J. Comp. Phys. 227, pp. 3595–3624. Journal of Computational Physics, 228(24):8985–9000, December 2009. URL: https://www.sciencedirect.com/science/article/pii/S0021999109004872, doi:10.1016/j.jcp.2009.09.002.

[TSS+19]

B. Tozer, D. T. Sandwell, W. H. F. Smith, C. Olson, J. R. Beale, and P. Wessel. Global Bathymetry and Topography at 15 Arc Sec: SRTM15+. Earth and Space Science, 6(10):1847–1864, October 2019. URL: https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2019EA000658, doi:10.1029/2019EA000658.

[WS96]

Pål Wessel and Walter H. F. Smith. A global, self-consistent, hierarchical, high-resolution shoreline database. Journal of Geophysical Research: Solid Earth, 101(B4):8741–8743, 1996. _eprint: https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1029/96JB00104. URL: https://onlinelibrary.wiley.com/doi/abs/10.1029/96JB00104, doi:10.1029/96JB00104.

[YCW+20]

Simon Yang, Bonnie X. Chang, Mark J. Warner, Thomas S. Weber, Annie M. Bourbonnais, Alyson E. Santoro, Annette Kock, Rolf E. Sonnerup, John L. Bullister, Samuel T. Wilson, and Daniele Bianchi. Global reconstruction reduces the uncertainty of oceanic nitrous oxide emissions and reveals a vigorous seasonal cycle. Proceedings of the National Academy of Sciences of the United States of America, 117(22):11954–11960, June 2020. doi:10.1073/pnas.1921914117.

[YRG+22]

Stephen G. Yeager, Nan Rosenbloom, Anne A. Glanville, Xian Wu, Isla Simpson, Hui Li, Maria J. Molina, Kristen Krumhardt, Samuel Mogen, Keith Lindsay, Danica Lombardozzi, Will Wieder, Who M. Kim, Jadwiga H. Richter, Matthew Long, Gokhan Danabasoglu, David Bailey, Marika Holland, Nicole Lovenduski, Warren G. Strand, and Teagan King. The Seasonal-to-Multiyear Large Ensemble (SMYLE) prediction system using the Community Earth System Model version 2. Geoscientific Model Development, 15(16):6451–6493, August 2022. Publisher: Copernicus GmbH. URL: https://gmd.copernicus.org/articles/15/6451/2022/, doi:10.5194/gmd-15-6451-2022.

[ZDH+23]

Jiawei Zhuang, Raphael Dussin, David Huard, Pascal Bourgault, Anderson Banihirwe, Stephane Raynaud, Brewster Malevich, Martin Schupfner, Filipe, Sam Levang, Charles Gauthier, André Jüling, Mattia Almansi, Richard Scott, RondeauG, Stephan Rasp, Trevor James Smith, Jemma Stachelek, Matthew Plough, and Xianxiang Li. xESMF: Universal regridder for geospatial data. 2023. URL: pangeo-data/xESMF, doi:10.5281/zenodo.4294774.

[EMODnetBConsortium22]

EMODnet Bathymetry Consortium. EMODnet Digital Bathymetry (DTM 2022). 2022. URL: https://doi.org/10.12770/ff3aff8a-cff1-44a3-a2c8-1910bf109f85, doi:10.12770/ff3aff8a-cff1-44a3-a2c8-1910bf109f85.

[JointRCenterCEMService19]

Joint Research Center, Copernicus Emergency Management Service. River discharge and related historical data from the global flood awareness system. 2019. doi:10.24381/cds.a4fdd6b9.